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253 lines
8.4 KiB
253 lines
8.4 KiB
irods installation on centos7: |
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# rpm --import https://packages.irods.org/irods-signing-key.asc |
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# wget -qO - https://packages.irods.org/renci-irods.yum.repo | sudo tee /etc/yum.repos.d/renci-irods.yum.repo |
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# yum install irods-server irods-database-plugin-postgres |
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# yum install postgresql-server |
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# postgresql-setup initdb |
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Initializing database ... OK |
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# systemctl start postgresql |
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# su - postgres |
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Last login: Fri Oct 26 11:30:44 CEST 2018 on pts/0 |
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$ psql |
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psql (9.2.24) |
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Type "help" for help. |
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postgres=# CREATE USER irods WITH PASSWORD 'ir0ds'; |
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CREATE ROLE |
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postgres=# CREATE DATABASE "ICAT"; |
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CREATE DATABASE |
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postgres=# GRANT ALL PRIVILEGES ON DATABASE "ICAT" TO irods; |
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GRANT |
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postgres=# \l |
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List of databases |
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Name | Owner | Encoding | Collate | Ctype | Access privileges |
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-----------+----------+----------+-------------+-------------+----------------------- |
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ICAT | postgres | UTF8 | en_US.UTF-8 | en_US.UTF-8 | =Tc/postgres + |
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| | | | | postgres=CTc/postgres+ |
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| | | | | irods=CTc/postgres |
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postgres | postgres | UTF8 | en_US.UTF-8 | en_US.UTF-8 | |
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template0 | postgres | UTF8 | en_US.UTF-8 | en_US.UTF-8 | =c/postgres + |
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| | | | | postgres=CTc/postgres |
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template1 | postgres | UTF8 | en_US.UTF-8 | en_US.UTF-8 | =c/postgres + |
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| | | | | postgres=CTc/postgres |
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(4 rows) |
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# python /var/lib/irods/scripts/setup_irods.py |
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The iRODS service account name needs to be defined. |
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iRODS user [irods]: |
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iRODS group [irods]: |
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+--------------------------------+ |
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| Setting up the service account | |
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+--------------------------------+ |
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Existing Group Detected: irods |
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Existing Account Detected: irods |
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Setting owner of /var/lib/irods to irods:irods |
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Setting owner of /etc/irods to irods:irods |
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iRODS server's role: |
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1. provider |
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2. consumer |
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Please select a number or choose 0 to enter a new value [1]: |
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Updating /etc/irods/server_config.json... |
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+-----------------------------------------+ |
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| Configuring the database communications | |
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+-----------------------------------------+ |
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You are configuring an iRODS database plugin. The iRODS server cannot be started until its database has been properly configured. |
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ODBC driver for postgres [PostgreSQL]: |
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Database server's hostname or IP address [localhost]: |
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Database server's port [5432]: |
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Database name [ICAT]: |
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Database username [irods]: |
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------------------------------------------- |
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Database Type: postgres |
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ODBC Driver: PostgreSQL |
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Database Host: localhost |
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Database Port: 5432 |
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Database Name: ICAT |
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Database User: irods |
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------------------------------------------- |
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Please confirm [yes]: |
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Database password: |
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Updating /etc/irods/server_config.json... |
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Error encountered running setup_irods: |
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Traceback (most recent call last): |
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File "/var/lib/irods/scripts/setup_irods.py", line 437, in main |
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setup_server(irods_config, json_configuration_file=options.json_configuration_file) |
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File "/var/lib/irods/scripts/setup_irods.py", line 116, in setup_server |
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database_interface.setup_database_config(irods_config) |
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File "/var/lib/irods/scripts/irods/database_interface.py", line 176, in setup_database_config |
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if database_already_in_use_by_irods(irods_config): |
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File "/var/lib/irods/scripts/irods/database_interface.py", line 73, in database_already_in_use_by_irods |
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with contextlib.closing(database_connect.get_database_connection(irods_config)) as connection: |
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File "/var/lib/irods/scripts/irods/database_connect.py", line 218, in get_database_connection |
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sys.exc_info()[2]) |
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File "/var/lib/irods/scripts/irods/database_connect.py", line 201, in get_database_connection |
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return pypyodbc.connect(connection_string.encode('ascii'), ansi=True) |
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File "/var/lib/irods/scripts/irods/pypyodbc.py", line 2452, in __init__ |
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self.connect(connectString, autocommit, ansi, timeout, unicode_results, readonly) |
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File "/var/lib/irods/scripts/irods/pypyodbc.py", line 2501, in connect |
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check_success(self, ret) |
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File "/var/lib/irods/scripts/irods/pypyodbc.py", line 988, in check_success |
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ctrl_err(SQL_HANDLE_DBC, ODBC_obj.dbc_h, ret, ODBC_obj.ansi) |
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File "/var/lib/irods/scripts/irods/pypyodbc.py", line 966, in ctrl_err |
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raise DatabaseError(state,err_text) |
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IrodsError: pypyodbc encountered an error connecting to the database: |
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('28000', '[28000] [unixODBC]FATAL: Ident authentication failed for user "irods"') |
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Exiting... |
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# vi /var/lib/pgsql/data/pg_hba.conf: |
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host all all 127.0.0.1/32 md5 |
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# systemctl restart postgresql |
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# python /var/lib/irods/scripts/setup_irods.py |
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The iRODS service account name needs to be defined. |
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iRODS user [irods]: |
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iRODS group [irods]: |
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+--------------------------------+ |
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| Setting up the service account | |
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+--------------------------------+ |
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Existing Group Detected: irods |
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Existing Account Detected: irods |
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Setting owner of /var/lib/irods to irods:irods |
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Setting owner of /etc/irods to irods:irods |
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iRODS server's role: |
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1. provider |
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2. consumer |
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Please select a number or choose 0 to enter a new value [1]: |
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Updating /etc/irods/server_config.json... |
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+-----------------------------------------+ |
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| Configuring the database communications | |
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+-----------------------------------------+ |
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You are configuring an iRODS database plugin. The iRODS server cannot be started until its database has been properly configured. |
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ODBC driver for postgres [PostgreSQL]: |
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Database server's hostname or IP address [localhost]: |
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Database server's port [5432]: |
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Database name [ICAT]: |
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Database username [irods]: |
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------------------------------------------- |
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Database Type: postgres |
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ODBC Driver: PostgreSQL |
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Database Host: localhost |
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Database Port: 5432 |
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Database Name: ICAT |
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Database User: irods |
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------------------------------------------- |
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Please confirm [yes]: |
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Database password: |
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Updating /etc/irods/server_config.json... |
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Listing database tables... |
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Salt for passwords stored in the database: |
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Updating /etc/irods/server_config.json... |
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+--------------------------------+ |
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| Configuring the server options | |
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+--------------------------------+ |
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iRODS server's zone name [tempZone]: testZone |
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iRODS server's port [1247]: |
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iRODS port range (begin) [20000]: |
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iRODS port range (end) [20199]: |
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Control Plane port [1248]: |
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Schema Validation Base URI (or off) [file:///var/lib/irods/configuration_schemas]: |
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iRODS server's administrator username [rods]: irods |
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------------------------------------------- |
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Zone name: testZone |
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iRODS server port: 1247 |
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iRODS port range (begin): 20000 |
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iRODS port range (end): 20199 |
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Control plane port: 1248 |
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Schema validation base URI: file:///var/lib/irods/configuration_schemas |
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iRODS server administrator: irods |
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------------------------------------------- |
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Please confirm [yes]: yes |
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iRODS server's zone key: |
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Zone key must be at least 1 character in length. |
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iRODS server's zone key: |
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iRODS server's negotiation key (32 characters): |
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Negotiation key must be exactly 32 characters in length. |
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iRODS server's negotiation key (32 characters): |
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Control Plane key (32 characters): |
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Updating /etc/irods/server_config.json... |
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+-----------------------------------+ |
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| Setting up the client environment | |
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+-----------------------------------+ |
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iRODS server's administrator password: |
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Updating /var/lib/irods/.irods/irods_environment.json... |
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+--------------------------+ |
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| Setting up default vault | |
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+--------------------------+ |
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iRODS Vault directory [/var/lib/irods/Vault]: |
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+-------------------------+ |
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| Setting up the database | |
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+-------------------------+ |
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Listing database tables... |
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Creating database tables... |
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+-------------------+ |
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| Starting iRODS... | |
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+-------------------+ |
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Validating [/var/lib/irods/.irods/irods_environment.json]... Success |
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Validating [/var/lib/irods/VERSION.json]... Success |
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Validating [/etc/irods/server_config.json]... Success |
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Validating [/etc/irods/host_access_control_config.json]... Success |
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Validating [/etc/irods/hosts_config.json]... Success |
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Ensuring catalog schema is up-to-date... |
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Updating to schema version 2... |
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Updating to schema version 3... |
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Updating to schema version 4... |
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Updating to schema version 5... |
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Catalog schema is up-to-date. |
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Starting iRODS server... |
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Success |
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+---------------------+ |
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| Attempting test put | |
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+---------------------+ |
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Putting the test file into iRODS... |
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Getting the test file from iRODS... |
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Removing the test file from iRODS... |
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Success. |
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+--------------------------------+ |
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| iRODS is installed and running | |
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+--------------------------------+ |
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