This is my full PhD thesis in R Markdown (using the bookdown package), containing a PDF and EPUB file, and a website in the ‘docs’ folder with the integral content of the book. https://git.io/PhDthesisAMR
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bookdown::gitbook:
css: style.css
config:
toc:
collapse: subsection
before: |
<li><a href="https://doi.org/10.33612/diss.177417131" target="blank"><img src="images/cover.jpg" style="width:90%; margin-left:5%;"></a></li>
after: |
<li class="copyright">© 2021 Matthijs Berends</li>
# edit: https://github.com/msberends/a_new_instrument_for_microbial_epidemiology/edit/master/%s
download: ["pdf", "epub"]
bookdown::pdf_book:
includes:
in_header: preamble.tex
latex_engine: xelatex
citation_package: natbib
keep_tex: yes
bookdown::epub_book: default
# no bootstrap 4 for now
# bookdown::bs4_book: default